Assume CON14 is our subject ID and it is inside directory $SUBJECTS_DIR.
After the display window and the control panel pops up, try playing with the menus and buttons.
tkmedit for volume
[code=”js”]
tkmedit CON14 rawavg.mgz
tkmedit CON14 rawavg.mgz lh.pial -aux-surface rh.pial
File > Load Segmentation > (for “Load Volume”) aparc+aseg.mgz (for “Load Color Table”) FreeSurferColorLUT.txt
[/code]
tksurfer for surface
[code=”js”]
tksurfer CON14 lh inflated
tksurfer CON14 lh pial
tksurfer CON14 rh pial
File > Label > Import Annotation > (browse to) lh.aparc.annot
[/code]
tkregister2 for check registration
[code=”js”]
tkregister2 –s CON14 –fstal
[/code]
Don't want to miss new papers in your field? Check out Stork we developed:
